Ribosomal protein L9



Ribosomal protein L9 (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. The images at the left and at the right correspond to one representative RPL9, i.e. the crystal structure of Ribosomal protein L9 from Bacillus stearothermophilus (1div).

3D Structures of Ribosomal protein L9
Update June 2011

RPL9
1div – GsRPL9 – Geobacillus stearothermophilus

2hvf, 2hba – GsRPL9 N-terminal (mutant)

2hbb - GsRPL9 N-terminal

1cqu - GsRPL9 N-terminal - NMR

2cql - hRPL9 N-terminal - human

L9 in 50S subunit+RNA
2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy – TtRPL10 in 50S subunit+RNA fragments - Thermus thermophilus

2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47, 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 3pyo, 3pyr, 3pyt, 3pyv -  TtRPL10 in 50S subunit+5S RRNA+23S RRNA

3fin - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM

2wwq – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli

3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3ofd, 3og0, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny, 3r8s, 3r8t - EcRPL9 in 50S subunit+5S RRNA+23S RRNA

3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86, 3izt, 3izu - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM

3kcr - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase

3j01 – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase – Cryo-EM

2rdo - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM

3bbo - RPL9 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach

3iy9 – RPL9 in 50S subunit – Leishmania taretolae

1nkw - DrRPL9 in 50S subunit+5S RRNA+23S RRNA - Deinococcus radiodurans

L9 in 50S subunit + antibiotics
1xbp, 1nwx, 1nwy, 1sm1 - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic

3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5 – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic

2qam, 2qao, 2qoz, 2qp1, 2qba, 2qbc, 3ofc, 3ofz, 3ofq, 3ofr, 1vt2, 3orb, 3oas, 3oat - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic

L9 in 60S subunit
3jyw - RPL10 in 60S subunit – Thermomyces lanuginosus – Cryo-EM

1s1i - yRPL10 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast

3o58, 3o5h - yRPL8 in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA

3izr – RPL9 in 60S subunit – wheat – Cryo EM

L9 in large + small ribosomal subunit
2zkr - RPL10 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog

L9 in 50S subunit + ribosome releasing factor (RRF)
2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+RRF

L9 in 50S subunit + various proteins
2vhm - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix

2j28 - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM

L9 in part of 50S subunit
487d – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM